Researcher Information

MUNAKATA Mizuho

Specially Appointed Assistant Professor

Discovering Biodiversity with Tiny Crustaceans: Ostracods

Department of Biological Sciences, Biodiversity

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Theme

Integrative studies on the phylogeny, taxonomy, population genetics, and biology of ostracods, a group of small aquatic crustaceans

FieldTaxonomy, Phylogeny, Population genetics, Biology
KeywordAquatic invertebrates, Freshwater, Arthropods, Crustaceans, Ostracods, Description, Undescribed species, Molecular phylogenetic analysis, Morphology, Life history, Natural history, Population dynamics, Long-distance dispersal, Bioinformatics

Introduction of Research

Amid growing global efforts toward the conservation and sustainable use of biodiversity, our understanding of species diversity—an essential unit of conservation—remains incomplete. Current estimates suggest that only 1–10% of all extant species have been formally described. This gap in knowledge is particularly pronounced for taxa that are small or poorly known to the general public. Nevertheless, given that ecosystems are maintained through complex interconnections among all species, elucidating biodiversity across a wide range of taxa, regardless of their public visibility, is of critical importance.
Genetic diversity—reflected in genome-level variation among populations of the same species—is likewise fundamental for conservation, yet its documentation lags even further behind species-level taxonomy.
My research centers on ostracods, a group of minute aquatic crustaceans characterized by a bivalved carapace enclosing a soft, shrimp-like body. Despite their occurrence across diverse aquatic environments—from deep-sea habitats to brackish waters and alpine streams—their extremely small body size (typically ~1 mm) contributes to their general obscurity and the significant gaps in our understanding of their diversity.
Focusing on freshwater ostracods, I conduct integrative research encompassing the following themes:
Taxonomy and phylogeny – to document species diversity, morphological variation, and phylogenetic relationships based on both morphological and molecular data.
Population genetics – to assess genetic structure, gene flow, and demographic patterns across populations.
Biological and ecological studies – to investigate distributional ranges, reproductive modes, and life-history traits.
Through this work, I aim to advance our understanding of ostracod diversity and contribute to broader discussions in biodiversity science.

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Morphylogy of Ostracoda. SEM figure of removing the left valve.
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Lissostrandesia fonticola Munakata, Tanaka, and Kakui, 2024 collected from springs in Eastern Japan.
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Cavernocypris hokkaiensis Munakata, Tanaka, and Kakui, 2022 collected from an alpine river in Daisetsu-zan Mountains, Japan.
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Heterocypris spadix Munakata, Tanaka, and Kakui, 2021 collected from mangrove forest in Okinawa, Japan.

Representative Achievements

Munakata M, Tanaka H, Kakui K (2024) A new genus and species of the spring-endemic Ostracoda (Cypricercinae, Cyprididae) and its genetic population structure among rheocrenic springs in Japan. Zoological Studies 63: 51.
Munakata M, Kakui K (2024) Lagenophryid ciliophorans on Japanese freshwater ostracods. Aquatic Animals 2024: AA2024-28.
宗像みずほ, 冨岡森理, 角井敬知 (2023) 利尻島に産する淡水生貝形虫. 利尻研究 42: 5–18.
Munakata M, Tanaka H, Kakui K (2022) Taxonomy and natural history of Cavernocypris hokkaiensis sp. nov., the first ostracod reported from alpine streams in Japan. Zoosystematics and Evolution 98: 117–127.
Munakata M, Tanaka H, Kakui K (2021) Heterocypris spadix sp. nov. (Crustacea: Ostracoda: Cypridoidea) from Japan, with information on its reproductive mode. Zoological Science 38: 287–296.
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Academic degreePh.D.
Self Introduction

I'm originally from Yamanashi Prefecture, Japan. I'm endlessly curious about ostracods and love learning anything and everything related to them. Outside of research, I enjoy hiking and observing nature, especially in the mountains. I also love watching movies and chatting about them with friends. Recently, I picked up calligraphy again—after nearly ten years away from it.

Academic background2020 B. S., Faculity of Science, Hokkaido University
2022 M. S., Graduate School of Science, Hokkaido University
2025 Ph.D., Graduate School of Science, Hokkaido University
2025年— Specieal Assistant Professor
Affiliated academic societyThe Japanese Society of Systematic Zoology, The Ecological Society of Japan, The Zoological Society of Japan
ProjectOcean Shot 「Holistic Genomic Approach to Asia-Pacific Marine Biodiversity」(Tohoku University)
Room addressScience Building 5 5-505
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